Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021392.1 Corchorus olitorius cultivar O-4 contig21425, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19267

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
794--822
15
1.9
15
100
0
58
51
27
6
13
1.66
2031--2101
21
3.4
21
94
3
117
28
18
26
26
1.98
6961--6994
2
17.0
2
93
0
59
2
0
47
50
1.16
6988--7133
73
2.0
73
93
0
247
21
4
34
39
1.73
13320--13502
69
2.7
69
90
0
294
28
16
28
26
1.97
13462--13798
50
6.7
50
94
0
584
29
11
26
32
1.92
14413--14562
50
3.0
50
92
1
239
37
14
16
32
1.88
15172--15245
26
2.9
25
71
15
62
16
0
9
74
1.07
17891--17926
19
1.9
18
88
5
54
27
22
8
41
1.82

Tables:   1

The End!