Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021394.1 Corchorus olitorius cultivar O-4 contig21427, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4947

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
380--450
27
2.6
27
88
0
106
39
25
18
16
1.91
789--1057
35
7.7
35
89
2
373
27
21
18
31
1.97
1067--1241
92
1.9
91
86
1
251
36
14
20
28
1.92
1727--1873
50
2.9
50
88
0
231
34
14
18
31
1.91
2235--2276
20
2.2
19
87
8
59
30
9
7
52
1.61

Tables:   1

The End!