Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021395.1 Corchorus olitorius cultivar O-4 contig21428, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34879

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1100--1135
16
2.4
14
86
13
54
88
0
2
8
0.59
6004--6100
31
3.2
31
72
19
87
46
15
15
22
1.83
6140--6187
12
3.9
12
77
2
51
31
25
20
22
1.98
6199--6248
19
2.5
20
77
3
57
68
0
6
26
1.13
10430--10470
21
2.0
21
95
0
73
31
41
12
14
1.83
12834--12902
21
3.3
21
76
6
61
20
21
26
31
1.98
13079--13104
2
13.0
2
100
0
52
50
0
0
50
1.00
20143--20190
10
5.1
10
78
12
57
47
0
0
52
1.00

Tables:   1

The End!