Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021405.1 Corchorus olitorius cultivar O-4 contig21438, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35712

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3333--3390
30
1.9
30
92
0
98
29
24
1
44
1.63
3868--3901
7
4.6
7
86
13
50
0
0
11
88
0.52
3873--3905
9
3.9
9
84
15
52
0
0
12
87
0.53
3868--3905
16
2.4
16
100
0
76
0
0
13
86
0.56
10657--10835
86
2.1
86
83
3
218
27
13
16
42
1.86
11971--12049
20
4.0
20
83
6
97
12
32
5
49
1.63
11968--12049
40
2.0
41
90
2
130
12
32
4
50
1.61
22409--22452
2
22.0
2
100
0
88
50
0
0
50
1.00
25226--25297
35
2.0
36
94
2
128
30
26
6
36
1.83
34406--34520
2
57.5
2
100
0
230
50
0
0
49
1.00

Tables:   1

The End!