Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021412.1 Corchorus olitorius cultivar O-4 contig21445, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42302

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6255--6330
29
2.6
29
74
12
75
42
14
25
18
1.88
8976--9063
31
2.8
31
78
1
95
14
22
29
32
1.94
10196--11277
439
2.5
436
83
5
1324
43
12
14
29
1.81
15982--16214
119
2.0
119
87
4
337
35
18
11
34
1.87
31120--31225
53
2.0
53
88
3
160
37
9
13
39
1.77
30991--31354
180
2.0
181
94
1
631
40
10
16
32
1.83
31176--31432
129
2.0
128
87
4
367
40
10
19
29
1.85
37108--37372
131
2.0
130
92
0
440
37
10
2
49
1.51
41159--41251
32
2.9
31
93
6
159
22
20
31
25
1.98

Tables:   1

The End!