Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021419.1 Corchorus olitorius cultivar O-4 contig21452, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33644

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9776--9836
26
2.2
28
80
5
72
37
19
19
22
1.94
12471--12635
84
2.0
84
97
0
312
23
22
20
34
1.97
13062--13120
9
6.1
9
74
14
55
57
0
3
38
1.15
13010--13119
31
3.6
31
74
7
89
51
0
3
43
1.25
13826--13884
29
2.0
30
80
9
68
30
20
18
30
1.96
15344--15425
29
2.7
30
75
7
78
30
19
17
32
1.95
16971--17002
10
3.2
10
90
0
55
46
0
9
43
1.35
17033--17064
10
3.2
10
90
0
55
46
0
9
43
1.35
20089--20141
28
1.9
28
88
3
81
32
32
7
28
1.85
23801--24333
266
2.0
266
99
0
1057
31
18
22
27
1.97
25961--25986
13
2.0
13
100
0
52
15
0
30
53
1.42
27113--27165
28
1.9
28
88
3
81
32
32
7
28
1.85
27299--27400
51
2.0
50
81
12
120
22
22
13
41
1.89
32922--33271
156
2.3
154
92
2
592
36
25
8
29
1.86

Tables:   1

The End!