Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021433.1 Corchorus olitorius cultivar O-4 contig21466, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8825

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1617--1659
16
2.7
15
89
10
68
11
6
13
67
1.41
2066--2122
31
1.9
28
86
10
78
35
7
15
42
1.75
4714--4753
21
1.9
21
90
10
64
15
45
25
15
1.84
5117--5146
15
2.1
14
93
6
51
13
16
6
63
1.50
7992--8034
16
2.7
15
86
10
59
13
6
11
67
1.41
7995--8034
15
2.5
16
88
8
55
15
7
10
67
1.41

Tables:   1

The End!