Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021445.1 Corchorus olitorius cultivar O-4 contig21478, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29566

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
276--2557
154
14.9
153
87
2
3154
22
17
18
41
1.91
276--2557
771
3.0
767
87
2
3271
22
17
18
41
1.91
5312--5353
22
1.9
22
85
0
57
33
11
23
30
1.91
5456--5505
22
2.3
21
80
6
55
42
6
14
38
1.70
5515--5572
22
2.6
22
88
0
80
32
12
13
41
1.82
5558--5621
22
2.9
21
81
9
74
39
6
14
40
1.71
12190--12238
25
2.0
25
84
8
64
40
0
0
59
0.98
12158--12240
22
3.8
21
74
19
73
39
2
0
57
1.12
12370--12399
11
2.8
11
95
5
53
0
36
56
6
1.26
17687--17737
19
2.7
19
93
0
84
62
15
17
3
1.47
24412--24458
24
2.0
24
91
0
76
34
23
12
29
1.92
25964--26001
7
5.4
7
100
0
76
13
28
15
42
1.85
27540--27568
14
2.1
14
100
0
58
20
13
17
48
1.81

Tables:   1

The End!