Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021447.1 Corchorus olitorius cultivar O-4 contig21480, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12088

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--69
28
2.4
29
90
7
115
50
15
5
27
1.67
1690--1754
27
2.4
27
84
5
87
24
21
1
52
1.56
2803--2933
70
1.9
70
95
0
235
37
12
22
27
1.91
4473--4539
28
2.5
28
85
4
93
50
2
22
23
1.62
4473--4542
27
2.6
26
82
6
86
48
2
21
27
1.64
5467--5551
31
2.7
31
92
0
143
16
20
18
44
1.87
7745--7784
7
6.0
7
91
2
57
87
0
10
2
0.63
8850--8932
42
2.0
42
93
6
143
42
19
9
28
1.83
9580--9634
23
2.4
23
96
0
101
34
3
10
50
1.55

Tables:   1

The End!