Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021451.1 Corchorus olitorius cultivar O-4 contig21484, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18363

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
564--785
112
2.0
112
100
0
444
33
11
11
43
1.77
1842--2232
30
13.1
30
92
0
649
46
18
14
20
1.84
2456--2503
22
2.2
22
92
0
78
16
14
35
33
1.89
2748--2806
22
2.5
24
78
13
68
23
22
28
25
1.99
2533--2912
169
2.3
168
91
0
616
34
16
20
28
1.95
2954--3409
69
6.6
69
95
0
804
29
16
28
26
1.96
4558--4587
15
2.0
15
93
0
51
63
13
10
13
1.52
11194--11238
22
2.0
23
87
12
67
66
17
6
8
1.40
11236--11311
26
2.7
29
88
6
113
43
7
13
35
1.73
11559--11588
15
2.0
15
93
0
51
63
13
6
16
1.50
12357--12387
14
2.2
14
100
0
62
74
6
12
6
1.21
13887--14053
14
12.7
12
91
3
50
14
0
11
73
1.11
13923--14076
7
21.7
7
98
1
290
13
0
13
72
1.12

Tables:   1

The End!