Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021468.1 Corchorus olitorius cultivar O-4 contig21501, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5442

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
164--461
22
13.3
22
67
17
100
38
9
17
34
1.83
568--643
22
3.5
22
80
3
82
35
7
11
44
1.70
1609--1677
21
3.5
21
65
25
60
26
14
10
49
1.75
1611--1687
37
2.1
37
97
0
145
28
12
11
46
1.77
2979--3035
12
4.5
12
81
12
69
24
15
8
50
1.72
2985--3037
27
2.0
26
92
3
88
22
18
9
49
1.76

Tables:   1

The End!