Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021470.1 Corchorus olitorius cultivar O-4 contig21503, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15430

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2037--2179
33
4.2
33
79
10
142
34
6
38
20
1.78
2030--2209
84
2.1
84
98
0
351
33
6
38
21
1.79
2037--2209
12
14.7
12
76
6
129
34
6
38
20
1.78
2037--2209
9
19.2
9
78
0
121
34
6
38
20
1.78
3408--3512
45
2.3
45
83
0
129
27
12
17
42
1.85
3784--3833
24
2.1
24
88
7
75
24
18
14
44
1.86
8742--8803
31
2.0
31
93
0
106
29
19
6
45
1.75
8843--9024
94
1.9
95
91
3
296
32
13
2
51
1.55
12882--12966
41
2.1
41
100
0
170
27
4
24
43
1.74
12882--12981
41
2.5
41
93
1
148
29
5
23
43
1.75
12930--13087
65
2.7
55
77
17
190
29
8
20
42
1.81
12963--13363
65
6.3
65
75
19
389
30
8
18
41
1.81
13108--13338
56
4.0
55
80
14
270
29
8
19
41
1.81
13226--13332
55
2.0
52
90
5
169
31
10
17
40
1.83
13124--13358
117
2.0
118
93
0
400
31
8
18
41
1.81
14247--14296
21
2.3
21
81
18
59
58
0
0
42
0.98
15177--15250
29
2.6
29
82
14
100
39
2
5
52
1.38
15177--15238
31
2.1
29
90
6
97
40
3
4
51
1.39

Tables:   1

The End!