Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021478.1 Corchorus olitorius cultivar O-4 contig21511, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17893

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28--215
50
4.4
44
72
18
155
32
17
20
28
1.96
34--178
77
1.9
78
91
1
238
33
18
20
28
1.96
383--503
19
5.9
19
73
14
98
28
33
17
20
1.95
371--501
42
3.1
42
94
0
226
26
32
17
23
1.97
401--479
23
3.6
23
76
13
94
26
31
18
22
1.97
550--618
14
4.9
14
89
0
102
34
30
15
18
1.93
538--618
28
2.9
28
90
0
117
35
28
14
20
1.93
658--700
14
3.1
14
82
0
59
34
32
13
18
1.90
635--736
53
1.9
53
88
4
152
30
28
17
23
1.97
5195--5275
29
2.7
30
73
17
78
27
9
16
46
1.78
5872--5909
20
1.9
20
94
0
67
15
18
26
39
1.91
5974--6035
29
2.1
29
85
5
81
46
9
19
24
1.79
7599--7642
21
2.1
21
83
8
54
54
9
20
15
1.68
8063--8105
20
2.2
20
87
8
61
13
23
16
46
1.83
9512--9571
19
3.0
21
80
14
90
35
28
11
25
1.91
10221--10251
7
4.4
7
95
0
53
48
25
0
25
1.52
13655--13697
20
2.2
20
87
8
61
13
23
16
46
1.83
15479--15588
56
2.0
56
87
0
157
30
21
12
34
1.91
16145--16189
19
2.4
18
85
7
63
62
0
2
35
1.08
16150--16189
19
2.2
19
90
4
64
65
0
0
35
0.93

Tables:   1

The End!