Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021479.1 Corchorus olitorius cultivar O-4 contig21512, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40120

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7655--7699
21
2.1
21
95
0
81
26
15
20
37
1.92
15593--15649
27
2.1
27
93
0
96
21
12
43
22
1.85
15599--15660
27
2.3
27
88
0
88
22
14
43
19
1.87
15932--15973
20
2.1
20
95
0
75
52
0
4
42
1.22
19286--19310
12
2.1
12
100
0
50
76
0
0
24
0.80
19282--19334
19
2.8
19
75
11
54
64
3
0
32
1.12
21733--21759
2
13.5
2
100
0
54
51
0
0
48
1.00
21984--22023
20
2.0
20
86
13
57
57
10
7
25
1.57
23048--23078
7
4.4
7
95
0
53
35
0
3
61
1.12
23602--23699
42
2.4
42
84
5
119
30
2
15
52
1.54
25272--25307
19
1.9
19
88
5
56
5
16
5
72
1.23
32774--32895
56
2.2
56
78
0
145
25
30
7
36
1.83
34562--34659
49
2.0
49
97
0
187
26
9
34
29
1.87

Tables:   1

The End!