Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021499.1 Corchorus olitorius cultivar O-4 contig21532, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20544

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67--663
28
21.4
28
74
7
358
17
27
27
28
1.98
518--663
55
2.6
56
87
6
199
22
25
25
26
2.00
180--617
83
5.2
83
74
6
285
18
26
26
28
1.98
1440--1570
57
2.3
58
83
1
156
16
19
33
29
1.94
7772--7803
16
2.0
16
100
0
64
31
25
6
37
1.81
9555--9728
55
3.1
55
62
19
124
41
22
10
24
1.86
9505--9730
113
2.0
113
96
1
418
38
22
12
26
1.89
11031--11055
12
2.1
12
100
0
50
0
8
0
92
0.40

Tables:   1

The End!