Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021506.1 Corchorus olitorius cultivar O-4 contig21539, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11291

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1197--2111
456
2.0
456
98
0
1755
32
12
14
41
1.83
6156--6256
53
1.9
53
100
0
202
43
14
13
27
1.84
9712--9737
2
13.0
2
100
0
52
50
0
0
50
1.00
10742--10830
16
5.6
16
79
10
103
6
14
38
40
1.73
10821--10872
23
2.3
23
86
0
68
3
19
50
26
1.65
10845--10879
17
2.1
17
88
0
52
0
22
51
25
1.48
11005--11038
8
4.4
8
96
3
61
61
0
0
38
0.96
11005--11041
13
2.9
13
88
11
51
62
0
0
37
0.96

Tables:   1

The End!