Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021508.1 Corchorus olitorius cultivar O-4 contig21541, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28397

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
474--506
14
2.4
14
94
0
57
18
12
12
57
1.64
5202--5237
17
2.1
17
94
0
63
11
16
36
36
1.84
6033--6071
11
3.5
11
82
6
51
20
0
2
76
0.90
6136--6191
3
18.7
3
100
0
112
32
0
0
67
0.91
6376--6432
28
2.0
28
96
0
105
49
17
19
14
1.80
19225--19263
20
2.0
20
85
9
55
43
5
25
25
1.75

Tables:   1

The End!