Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021511.1 Corchorus olitorius cultivar O-4 contig21544, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17579

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3993--4219
29
7.8
29
80
7
257
17
21
22
38
1.93
3993--4219
87
2.6
85
86
4
294
17
21
22
38
1.93
8883--8918
19
1.9
18
88
5
54
41
8
22
27
1.82
9520--9557
18
2.1
19
90
5
60
10
15
10
63
1.52
13647--13688
17
2.4
18
88
11
61
78
19
2
0
0.86
15170--15206
19
2.0
20
89
10
60
27
29
5
37
1.79

Tables:   1

The End!