Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021513.1 Corchorus olitorius cultivar O-4 contig21546, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17078

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2504--2532
10
2.9
10
100
0
58
37
10
31
20
1.86
2543--2636
21
4.5
21
86
5
136
27
20
28
23
1.99
3478--3518
20
2.0
20
90
0
64
12
9
17
60
1.57
3690--3754
29
2.3
28
78
19
73
47
9
18
24
1.77
7235--7282
21
2.3
21
100
0
96
50
22
8
18
1.74
7575--7607
17
1.9
17
100
0
66
48
18
12
21
1.80
16502--16531
12
2.4
13
88
11
53
66
13
6
13
1.43

Tables:   1

The End!