Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021517.1 Corchorus olitorius cultivar O-4 contig21550, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5001

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
402--806
52
7.8
51
89
1
567
29
19
14
36
1.91
401--806
103
3.9
104
89
2
593
29
18
14
36
1.91
391--806
154
2.7
154
91
1
647
30
18
14
37
1.90
1866--1935
32
2.2
32
84
5
88
20
7
15
57
1.62
3951--4010
31
1.9
31
96
0
111
30
16
18
35
1.93

Tables:   1

The End!