Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021522.1 Corchorus olitorius cultivar O-4 contig21555, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4346

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
599--638
8
4.8
9
81
12
50
80
0
20
0
0.72
599--638
12
3.6
11
87
12
64
80
0
20
0
0.72
716--804
6
14.7
6
82
10
110
80
0
19
0
0.70
725--820
13
7.8
12
79
13
79
80
0
16
3
0.84
713--820
12
8.9
11
78
17
83
79
0
17
2
0.85
1617--1690
28
2.7
27
77
8
71
24
21
12
41
1.87

Tables:   1

The End!