Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021537.1 Corchorus olitorius cultivar O-4 contig21570, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32280

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2904--2965
29
2.1
29
82
5
72
40
3
11
45
1.56
3853--3912
29
2.0
30
87
3
86
51
0
3
45
1.17
4015--4063
26
1.9
26
88
12
75
42
0
0
57
0.99
6884--6939
26
2.2
26
84
9
71
58
0
12
28
1.34
12468--12498
14
2.2
14
94
0
53
0
38
16
45
1.47
12643--12728
42
2.0
42
91
4
138
19
20
5
53
1.66
22404--22459
15
4.1
14
73
19
55
0
8
16
75
1.05
22407--22472
7
9.9
7
77
12
59
0
6
13
80
0.89
22416--22466
26
2.0
26
88
0
75
0
5
13
80
0.89

Tables:   1

The End!