Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021541.1 Corchorus olitorius cultivar O-4 contig21574, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45252

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6550--6673
63
2.0
63
98
0
239
30
18
8
42
1.79
12903--13164
107
2.5
106
91
2
404
41
9
8
40
1.67
13187--13216
10
3.0
10
95
0
51
86
0
13
0
0.57
13179--13213
18
1.9
18
94
0
61
88
0
8
2
0.61
13283--13332
24
2.1
24
82
10
59
38
12
24
26
1.90
13503--13814
157
2.0
157
92
2
520
42
13
8
34
1.75
13959--14003
21
2.1
21
84
8
56
26
20
17
35
1.95
15451--15485
11
3.2
11
95
0
61
31
0
28
40
1.57
21657--21699
18
2.4
18
92
3
70
27
4
16
51
1.64
36424--36460
2
18.5
2
100
0
74
48
0
51
0
1.00
40560--40632
27
2.7
27
100
0
146
41
26
13
19
1.88

Tables:   1

The End!