Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021548.1 Corchorus olitorius cultivar O-4 contig21581, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9091

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1489--1534
2
23.0
2
100
0
92
50
50
0
0
1.00
1950--1993
22
2.0
22
81
4
52
29
11
13
45
1.79
4642--4800
62
2.6
61
92
3
264
30
13
13
42
1.83
4781--4881
50
2.0
49
88
1
148
35
11
8
43
1.73
5005--5040
17
2.1
17
94
0
63
50
0
11
38
1.38
4995--5039
9
5.1
9
86
5
56
46
0
11
42
1.39
7627--7663
16
2.3
16
90
0
56
27
10
0
62
1.28
7655--7720
7
9.4
7
74
11
55
39
1
6
53
1.35
7761--7798
11
3.5
11
92
3
60
50
0
2
47
1.15
7761--7802
2
22.5
2
81
13
54
50
0
2
47
1.14

Tables:   1

The End!