Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021556.1 Corchorus olitorius cultivar O-4 contig21589, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17224

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5839--5916
24
3.2
24
75
0
84
21
41
15
21
1.90
8490--8550
31
2.0
31
96
0
113
40
9
8
40
1.68
8546--9349
402
2.0
399
96
0
1464
30
16
16
37
1.90
9563--9891
43
7.8
41
81
12
382
42
27
9
20
1.83
9563--9892
41
7.8
43
84
7
417
42
26
9
20
1.83
9563--9888
84
3.9
84
95
0
571
42
26
9
20
1.82
10001--10039
2
19.5
2
89
0
60
46
2
0
51
1.14
14749--14784
18
1.9
19
88
5
56
30
5
27
36
1.80

Tables:   1

The End!