Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021563.1 Corchorus olitorius cultivar O-4 contig21596, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8838

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
859--883
2
12.5
2
100
0
50
48
0
0
52
1.00
3087--3130
22
2.0
22
95
4
81
47
0
15
36
1.46
4554--4652
22
4.6
21
84
5
101
41
12
9
37
1.74
4554--4630
22
3.5
22
89
1
102
41
10
9
38
1.71
4593--4693
22
4.6
23
75
11
79
40
13
8
36
1.76
4592--4697
44
2.4
44
78
14
112
40
14
8
36
1.76
4613--4717
22
4.8
23
75
12
96
36
15
9
39
1.80
4612--4707
44
2.2
44
79
7
106
37
16
9
36
1.81
4674--4755
42
1.9
43
80
11
98
24
17
9
48
1.76
5627--5694
35
1.9
35
87
0
100
38
32
2
26
1.71

Tables:   1

The End!