Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021565.1 Corchorus olitorius cultivar O-4 contig21598, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27780

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3097--3298
101
2.0
101
91
0
323
31
19
14
34
1.92
4517--4566
3
16.7
3
82
0
64
62
4
34
0
1.14
12604--12668
11
5.3
11
84
12
58
80
0
15
4
0.88
12612--12668
14
4.5
12
83
14
62
80
0
14
5
0.87
12609--12673
27
2.5
25
80
9
76
80
0
15
4
0.88
12604--12701
23
4.5
21
72
22
62
76
2
16
5
1.06
12612--12701
39
2.4
39
80
9
105
76
2
15
5
1.07
12662--12708
23
2.0
23
95
0
85
68
8
14
8
1.39
20069--20207
72
1.9
72
94
0
242
33
16
25
23
1.96
23909--23946
20
1.9
20
88
0
58
31
26
18
23
1.97

Tables:   1

The End!