Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021566.1 Corchorus olitorius cultivar O-4 contig21599, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36281

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2810--2868
23
2.5
24
76
15
70
40
16
6
35
1.76
2902--2973
31
2.4
30
84
11
85
48
12
12
26
1.76
10714--10745
16
2.0
16
100
0
64
31
6
12
50
1.65
10986--11030
21
2.1
21
87
0
63
35
11
22
31
1.89
12431--12494
33
1.9
33
90
0
101
15
32
26
25
1.95
26417--26446
3
10.0
3
92
0
51
0
36
0
63
0.95
32615--32936
157
2.1
157
95
0
572
33
18
16
31
1.93
35658--35684
14
1.9
14
100
0
54
22
7
18
51
1.70
35873--35955
29
2.8
31
76
9
91
36
10
15
37
1.83
35870--35968
29
3.3
31
74
8
87
36
11
19
33
1.87

Tables:   1

The End!