Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021569.1 Corchorus olitorius cultivar O-4 contig21602, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13317

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1383--1416
2
17.0
2
100
0
68
50
0
0
50
1.00
7342--7422
40
2.0
40
95
0
144
24
14
12
48
1.79
8095--8135
20
2.0
21
90
4
66
43
14
26
14
1.84
8728--8764
16
2.4
16
90
4
58
32
0
10
56
1.34
8728--8772
16
2.9
15
83
6
54
33
0
11
55
1.35
8804--8842
18
2.1
19
85
4
53
64
17
5
12
1.46
9864--10192
41
7.8
41
84
9
414
43
25
10
20
1.83
9864--10192
84
3.9
84
93
1
561
43
25
10
20
1.83
9864--10192
167
2.0
169
93
1
563
43
25
10
20
1.83

Tables:   1

The End!