Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021575.1 Corchorus olitorius cultivar O-4 contig21608, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28948

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1787--1825
18
2.2
18
85
0
51
30
2
25
41
1.69
2668--2704
9
4.2
9
96
3
67
81
10
0
8
0.89
4743--5542
30
26.8
30
86
2
995
19
14
20
46
1.85
4744--5544
269
3.0
269
92
1
1263
19
14
19
45
1.85
5976--6051
28
2.7
28
83
6
100
14
15
26
43
1.85
7140--7170
2
15.5
2
100
0
62
48
0
0
51
1.00
11108--11159
27
1.9
27
92
0
86
38
1
15
44
1.58
24876--24910
18
2.1
18
89
10
56
45
5
11
37
1.64

Tables:   1

The End!