Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021585.1 Corchorus olitorius cultivar O-4 contig21618, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44546

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74--98
7
3.6
7
100
0
50
0
0
88
12
0.53
279--385
22
5.1
20
71
15
65
37
9
14
38
1.79
2177--2346
90
1.9
89
90
3
270
40
7
12
38
1.72
3761--3890
69
1.9
69
82
6
165
23
26
14
36
1.93
7453--7513
29
2.1
29
84
6
79
29
8
19
42
1.80
26027--26082
24
2.3
24
84
6
78
50
8
33
7
1.61
26051--26278
60
3.8
60
92
0
348
46
12
32
9
1.74
29919--29959
4
10.5
4
92
5
66
80
0
19
0
0.71
44502--44542
2
20.5
2
100
0
82
48
0
51
0
1.00

Tables:   1

The End!