Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021589.1 Corchorus olitorius cultivar O-4 contig21622, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34511

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1014--1062
21
2.3
21
82
6
55
40
16
28
14
1.87
2251--2306
26
2.2
26
83
3
69
41
7
5
46
1.54
2374--3071
332
2.1
332
83
4
888
32
15
17
34
1.91
6184--6251
2
34.5
2
91
2
111
47
0
2
50
1.16
7146--7207
26
2.3
27
88
5
90
4
46
3
45
1.40
7150--7207
28
2.0
29
93
3
100
5
46
3
44
1.42
11339--11368
14
2.1
14
93
0
51
23
6
26
43
1.78
12023--12127
54
2.0
53
88
5
158
35
7
19
38
1.80
20502--20545
16
2.7
16
85
3
52
38
2
11
47
1.52
20525--20561
14
2.6
15
79
12
51
45
2
10
40
1.53
22563--22719
79
2.0
78
94
1
278
33
11
4
50
1.58
23617--23682
34
1.9
34
84
6
89
19
7
18
54
1.67
25170--25216
19
2.5
19
100
0
94
34
34
19
12
1.89
33472--33576
29
3.7
29
82
3
97
21
14
22
40
1.90

Tables:   1

The End!