Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021598.1 Corchorus olitorius cultivar O-4 contig21631, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18399

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
233--331
31
3.3
31
79
11
132
32
15
26
26
1.95
4467--4505
2
19.5
2
100
0
78
51
0
0
48
1.00
7516--7546
7
4.4
7
100
0
62
16
67
0
16
1.23
15125--15167
20
2.3
19
85
14
63
0
51
0
48
1.00
15128--15170
17
2.5
17
92
3
68
0
51
0
48
1.00
17924--17992
21
3.3
21
93
4
113
26
27
17
28
1.97
18325--18360
8
4.5
8
100
0
72
0
0
11
88
0.50
18325--18370
24
1.9
24
82
8
58
0
4
13
82
0.81

Tables:   1

The End!