Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021612.1 Corchorus olitorius cultivar O-4 contig21645, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26790

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5953--6053
22
4.6
22
74
9
80
40
8
8
41
1.68
6115--6218
44
2.4
44
88
0
145
34
18
10
36
1.85
5997--6218
22
10.0
22
68
4
113
35
15
11
37
1.84
10998--11058
23
2.6
23
78
2
68
16
26
40
16
1.89
11569--12200
327
1.9
327
96
0
1174
25
18
21
35
1.95
15766--15808
17
2.5
17
88
0
68
34
4
25
34
1.77
23765--23798
18
1.9
18
88
5
52
47
2
11
38
1.55
24648--24683
19
1.9
18
88
5
54
41
8
22
27
1.82

Tables:   1

The End!