Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021622.1 Corchorus olitorius cultivar O-4 contig21655, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35929

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
554--601
14
3.0
18
72
27
54
60
4
14
20
1.51
5185--5220
18
1.9
18
88
5
54
38
2
22
36
1.69
10949--10973
13
1.9
13
100
0
50
40
4
16
40
1.67
11869--11904
18
1.9
18
88
5
54
38
2
22
36
1.69
14408--14470
22
2.9
23
83
6
69
57
3
33
6
1.40
25198--25245
21
2.3
21
88
0
69
8
25
54
12
1.65
33977--34051
27
2.8
26
83
4
87
20
13
25
41
1.88

Tables:   1

The End!