Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021633.1 Corchorus olitorius cultivar O-4 contig21666, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20804

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3047--3400
78
4.5
78
88
1
487
23
17
26
33
1.96
3096--3400
157
2.0
155
91
1
493
22
18
26
32
1.97
10481--10506
1
26.0
1
100
0
52
100
0
0
0
0.00
10819--11066
124
2.0
124
96
0
460
20
25
16
37
1.93
14633--14691
29
2.1
28
87
9
84
47
6
6
38
1.57
14646--14702
29
2.0
29
89
0
87
45
5
12
36
1.64
15041--15065
13
1.9
13
100
0
50
88
0
0
12
0.53

Tables:   1

The End!