Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021642.1 Corchorus olitorius cultivar O-4 contig21675, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3399

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--190
105
1.8
105
97
0
362
29
27
12
30
1.93
150--287
68
2.0
69
87
1
197
29
27
16
26
1.97
399--565
47
3.6
46
86
4
219
17
23
21
37
1.94
578--995
141
3.0
141
93
1
705
27
20
16
35
1.94
1058--1161
37
2.8
37
76
2
100
28
24
10
36
1.89
1058--1158
39
2.6
39
76
3
98
28
23
10
36
1.89
1141--1649
40
12.8
40
86
3
641
30
21
11
36
1.88
2287--2329
21
2.0
21
100
0
86
27
23
9
39
1.85

Tables:   1

The End!