Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021647.1 Corchorus olitorius cultivar O-4 contig21680, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49022

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
764--797
12
2.8
12
90
4
50
5
41
38
14
1.70
758--892
36
3.7
36
94
3
227
4
39
40
15
1.67
9740--9819
38
2.2
36
84
8
99
62
8
10
18
1.52
13342--13371
14
2.1
15
93
6
53
13
13
6
66
1.43
14987--15065
22
3.4
22
70
16
77
25
27
22
24
2.00
14984--15077
49
1.9
49
95
0
170
27
24
24
23
2.00
25792--25826
8
4.1
8
92
7
52
34
22
0
42
1.54
26052--26077
13
2.0
13
100
0
52
7
7
23
61
1.49
33659--33694
19
1.9
18
88
5
54
27
22
8
41
1.82

Tables:   1

The End!