Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021648.1 Corchorus olitorius cultivar O-4 contig21681, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12519

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1330--1724
36
11.3
35
67
16
205
37
31
14
16
1.89
1392--1635
72
3.4
72
78
5
228
38
31
13
17
1.88
1392--1724
107
3.1
108
79
4
298
37
30
15
16
1.90
1395--1721
179
1.8
179
93
0
573
36
31
14
17
1.90
2079--2146
36
1.9
36
87
3
102
38
23
22
16
1.93
2083--2171
36
2.5
35
80
8
92
38
23
20
17
1.93
2470--2507
13
3.0
13
96
3
69
39
7
31
21
1.82
2499--2536
19
2.0
19
94
0
67
44
5
18
31
1.72
10031--10088
30
1.9
30
89
3
89
50
17
13
18
1.79
10203--10422
91
2.4
91
82
6
248
45
13
5
34
1.68
10139--10451
92
3.4
91
78
7
312
45
12
5
36
1.67
10792--10941
73
2.1
73
93
0
255
33
22
16
28
1.95

Tables:   1

The End!