Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021649.1 Corchorus olitorius cultivar O-4 contig21682, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10833

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15--141
32
3.8
32
74
14
80
43
18
14
23
1.87
160--444
92
3.1
90
81
7
288
46
12
5
35
1.66
4035--4241
90
2.3
87
83
7
254
32
25
6
35
1.81
5423--5488
31
2.1
32
91
2
107
43
0
30
25
1.55
6053--6128
29
2.6
29
91
2
125
14
28
19
36
1.91
10223--10831
331
1.8
331
98
0
1182
36
14
22
27
1.92

Tables:   1

The End!