Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021655.1 Corchorus olitorius cultivar O-4 contig21688, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15294

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57--103
23
2.1
23
92
4
78
38
27
6
27
1.81
1054--1091
9
4.3
9
90
3
60
47
0
18
34
1.49
2370--2510
49
2.9
47
81
11
169
28
16
5
49
1.68
3692--3724
2
16.5
2
100
0
66
51
0
0
48
1.00
7821--7857
19
2.0
18
94
5
65
37
0
2
59
1.12
7955--8052
31
3.2
31
76
5
110
31
21
12
34
1.90
11685--11742
10
6.4
9
74
21
50
10
10
3
75
1.15
11691--11728
16
2.3
17
86
4
51
7
7
2
81
0.96
12867--12915
21
2.3
21
82
6
55
40
16
28
14
1.87

Tables:   1

The End!