Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021681.1 Corchorus olitorius cultivar O-4 contig21714, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11552

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--36
2
18.0
2
100
0
72
50
0
0
50
1.00
575--610
9
4.3
9
80
20
51
55
0
11
33
1.35
565--610
15
3.1
15
93
0
74
54
0
13
32
1.39
764--808
21
2.1
21
87
0
63
37
6
17
37
1.76
1171--1230
30
2.0
30
90
3
95
21
10
13
55
1.67
5018--5058
2
20.5
2
100
0
82
51
0
0
48
1.00
11066--11552
233
2.1
233
100
0
974
32
16
17
33
1.93

Tables:   1

The End!