Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021688.1 Corchorus olitorius cultivar O-4 contig21721, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5959

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1446--1481
16
2.2
17
95
5
65
33
22
16
27
1.95
2197--2260
7
8.9
7
72
24
53
79
1
18
0
0.81
2210--2256
6
7.8
6
76
9
51
78
2
19
0
0.85
2197--2260
24
2.5
26
75
12
69
79
1
18
0
0.81
4944--4990
22
2.1
22
84
7
60
61
2
12
23
1.42
4867--5051
93
2.0
93
90
2
291
52
2
10
34
1.48
5504--5553
21
2.4
21
96
0
91
42
12
24
22
1.87

Tables:   1

The End!