Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021689.1 Corchorus olitorius cultivar O-4 contig21722, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52403

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1026--1057
14
2.2
15
94
5
57
53
6
28
12
1.62
964--1133
90
1.9
90
98
0
331
54
14
16
14
1.71
4697--4778
22
3.8
22
78
1
85
43
6
7
42
1.57
5461--5503
3
14.3
3
95
0
68
4
0
67
27
1.10
16202--16242
20
2.0
20
90
0
64
24
4
41
29
1.75
17082--17114
2
16.5
2
93
0
57
48
0
3
48
1.17
17696--17757
25
2.6
25
84
5
74
58
4
6
30
1.44
22142--22178
6
6.2
6
96
0
65
29
16
51
2
1.58
35272--35466
60
3.3
60
84
3
234
34
18
24
22
1.96
48181--48413
118
2.0
118
93
1
405
29
19
22
28
1.98

Tables:   1

The End!