Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021697.1 Corchorus olitorius cultivar O-4 contig21730, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5349

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1925--1967
2
21.0
2
95
4
77
48
0
2
48
1.14
2847--2892
2
22.5
2
82
12
58
47
6
0
45
1.28
2847--2892
13
3.5
13
85
8
67
47
6
0
45
1.28
2848--2898
17
3.1
16
76
20
52
45
7
1
45
1.44
4802--4827
13
2.0
13
100
0
52
30
15
15
38
1.88
5181--5250
36
1.9
36
88
0
104
61
8
8
21
1.52

Tables:   1

The End!