Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021699.1 Corchorus olitorius cultivar O-4 contig21732, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7822

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
53--500
39
11.8
39
72
8
217
36
18
19
25
1.94
167--342
77
2.3
77
82
7
198
35
17
21
25
1.95
90--342
115
2.2
116
80
6
282
37
17
20
24
1.94
394--455
31
2.0
32
90
3
99
37
19
22
20
1.95
454--633
50
3.6
49
85
3
227
33
16
21
29
1.95
1172--1200
2
14.5
2
100
0
58
51
0
0
48
1.00

Tables:   1

The End!