Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021700.1 Corchorus olitorius cultivar O-4 contig21733, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14978

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1682--1978
45
6.6
45
93
0
515
35
23
28
11
1.90
2140--2215
39
1.9
40
86
2
109
21
21
30
27
1.98
3273--3299
10
2.7
10
100
0
54
92
7
0
0
0.38
4615--4692
36
2.2
36
88
4
113
33
23
14
29
1.93
4852--4943
12
7.7
12
76
13
64
32
23
8
34
1.86
4845--4948
36
2.9
36
81
11
133
31
24
8
35
1.86
10702--10746
7
6.9
7
79
20
53
37
0
0
62
0.96
10704--10746
12
3.3
12
84
15
59
37
0
0
62
0.95

Tables:   1

The End!