Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021702.1 Corchorus olitorius cultivar O-4 contig21735, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12674

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10--136
50
2.5
50
87
3
164
29
20
14
35
1.92
5703--5746
14
3.4
14
75
18
58
25
0
9
65
1.21
6728--6753
8
3.2
8
100
0
52
50
0
23
26
1.50
9166--9221
18
2.9
18
80
20
60
42
12
10
33
1.77
9201--9278
22
3.5
22
77
8
79
38
15
8
37
1.79
9368--9492
22
5.6
23
73
12
82
35
20
7
36
1.81
9454--9645
22
8.7
22
69
13
99
37
15
9
37
1.80

Tables:   1

The End!