Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021704.1 Corchorus olitorius cultivar O-4 contig21737, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21576

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8121--8166
22
2.1
21
88
11
67
6
13
30
50
1.66
8752--8839
35
2.7
31
84
13
106
28
17
19
35
1.94
13058--13133
21
3.6
21
91
3
109
39
18
38
3
1.69
13260--13299
21
1.9
21
84
0
53
27
25
37
10
1.88
16631--16657
2
13.5
2
100
0
54
48
0
0
51
1.00
21188--21573
37
10.5
37
92
2
636
28
16
19
35
1.94
21188--21573
73
5.2
74
93
1
636
28
16
19
35
1.94
21188--21573
110
3.5
110
94
2
641
28
16
19
35
1.94

Tables:   1

The End!