Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01021707.1 Corchorus olitorius cultivar O-4 contig21740, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29390

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45--69
2
12.5
2
100
0
50
52
0
0
48
1.00
241--287
23
2.1
23
84
11
62
34
17
6
42
1.74
8732--8781
3
16.7
3
87
8
75
30
0
2
68
1.01
14988--15021
18
1.9
17
88
5
50
5
26
11
55
1.58
19580--19717
32
4.2
33
75
11
106
13
35
36
13
1.85
19955--19998
18
2.4
18
85
7
54
29
4
6
59
1.44
20435--20491
29
2.0
29
82
0
69
36
0
8
54
1.32
22669--22820
76
2.0
76
80
10
168
17
29
27
25
1.98
23751--23800
26
1.9
26
87
0
73
14
20
12
54
1.71
23863--23897
3
11.7
3
87
0
52
25
0
0
74
0.82
23863--23900
12
3.2
12
92
0
58
23
0
0
76
0.79
25948--25988
21
1.9
22
90
5
66
21
26
26
24
2.00

Tables:   1

The End!